Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC38A9Q8NBW4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SLC38A9Q8NBW4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC38A9Q8NBW4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SLC38A9Q8NBW4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 REXO1L12P-201ENST00000622156 912 ntBASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC38A9Q8NBW4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 BX088651.1-201ENST00000540551 451 ntBASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 AC092720.2-201ENST00000602388 1665 ntBASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SLC38A9Q8NBW4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 AC211429.1-201ENST00000415277 523 ntBASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MIR4785-201ENST00000585005 73 ntBASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC38A9Q8NBW4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 ECEL1P3-201ENST00000427961 737 ntBASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 AL137060.1-201ENST00000618151 2648 ntBASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC38A9Q8NBW4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 SMG8-203ENST00000578922 2178 ntBASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC38A9Q8NBW4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms