Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
C11orf42Q8N5U0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 GABARAPL3-202ENST00000624044 1851 ntBASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C11orf42Q8N5U0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C11orf42Q8N5U0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 LINC01006-201ENST00000333319 2292 ntBASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 KRT18P6-201ENST00000555540 1265 ntBASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 HLA-B-256ENST00000639848 1089 ntBASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 AL162377.1-201ENST00000618844 1793 ntBASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 DPP3P2-201ENST00000416030 1696 ntBASIC16.53■□□□□ 0.24
C11orf42Q8N5U0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf42Q8N5U0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf42Q8N5U0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms