Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 AC113347.1-201ENST00000413321 391 ntBASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 FITM1-202ENST00000559294 800 ntBASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 NAPSB-206ENST00000562112 1266 ntBASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 LINC01568-207ENST00000641790 1380 ntBASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNPOQ8N3V7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 AC005521.1-201ENST00000393351 872 ntBASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 MIR1238-201ENST00000408483 83 ntBASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SYNPOQ8N3V7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 NIFKP9-201ENST00000419265 221 ntBASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.29■□□□□ 0.84
SYNPOQ8N3V7 AL024507.2-201ENST00000606070 2574 ntBASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.28■□□□□ 0.84
SYNPOQ8N3V7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 KRT16P1-201ENST00000399124 1418 ntBASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 KRT8P9-201ENST00000558927 1449 ntBASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SYNPOQ8N3V7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SYNPOQ8N3V7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SYNPOQ8N3V7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms