Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
APLFQ8IW19 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
APLFQ8IW19 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
APLFQ8IW19 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APLFQ8IW19 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.67■□□□□ 0.74
APLFQ8IW19 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
APLFQ8IW19 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
APLFQ8IW19 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.67■□□□□ 0.74
APLFQ8IW19 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.67■□□□□ 0.74
APLFQ8IW19 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.67■□□□□ 0.74
APLFQ8IW19 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
APLFQ8IW19 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.66■□□□□ 0.74
APLFQ8IW19 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
APLFQ8IW19 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.66■□□□□ 0.74
APLFQ8IW19 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
APLFQ8IW19 RNA5SP413-201ENST00000516373 109 ntBASIC19.66■□□□□ 0.74
APLFQ8IW19 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.66■□□□□ 0.74
APLFQ8IW19 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.66■□□□□ 0.74
APLFQ8IW19 AC008687.6-201ENST00000596318 630 ntBASIC19.66■□□□□ 0.74
APLFQ8IW19 AC008175.2-201ENST00000612840 297 ntBASIC19.66■□□□□ 0.74
APLFQ8IW19 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.66■□□□□ 0.74
APLFQ8IW19 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.66■□□□□ 0.74
APLFQ8IW19 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.66■□□□□ 0.74
APLFQ8IW19 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
APLFQ8IW19 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APLFQ8IW19 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
APLFQ8IW19 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 NEFHP1-201ENST00000412845 2629 ntBASIC19.65■□□□□ 0.74
APLFQ8IW19 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.65■□□□□ 0.74
APLFQ8IW19 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 KRT18P29-201ENST00000397031 1267 ntBASIC19.65■□□□□ 0.74
APLFQ8IW19 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.65■□□□□ 0.74
APLFQ8IW19 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
APLFQ8IW19 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.65■□□□□ 0.74
APLFQ8IW19 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.65■□□□□ 0.74
APLFQ8IW19 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
APLFQ8IW19 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APLFQ8IW19 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.64■□□□□ 0.74
APLFQ8IW19 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APLFQ8IW19 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.64■□□□□ 0.74
APLFQ8IW19 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APLFQ8IW19 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
APLFQ8IW19 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.64■□□□□ 0.74
APLFQ8IW19 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 POU5F1P4-201ENST00000413175 1085 ntBASIC19.64■□□□□ 0.73
APLFQ8IW19 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 AL162412.1-201ENST00000567129 965 ntBASIC19.64■□□□□ 0.73
APLFQ8IW19 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.64■□□□□ 0.73
APLFQ8IW19 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
APLFQ8IW19 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.64■□□□□ 0.73
APLFQ8IW19 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.64■□□□□ 0.73
APLFQ8IW19 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
APLFQ8IW19 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APLFQ8IW19 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.64■□□□□ 0.73
APLFQ8IW19 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms