Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 AC006058.3-201ENST00000606217 1069 ntBASIC13.12□□□□□ -0.31
SCXQ7RTU7 AC100791.3-201ENST00000617619 330 ntBASIC13.12□□□□□ -0.31
SCXQ7RTU7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.12□□□□□ -0.31
SCXQ7RTU7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SCXQ7RTU7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 PCDHAC2-203ENST00000615316 3011 ntBASIC13.11□□□□□ -0.31
SCXQ7RTU7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 AL589743.5-201ENST00000616611 1050 ntBASIC13.11□□□□□ -0.31
SCXQ7RTU7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SCXQ7RTU7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SCXQ7RTU7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 MCRIP2P1-201ENST00000394346 511 ntBASIC13.1□□□□□ -0.31
SCXQ7RTU7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 AC007322.3-201ENST00000426526 701 ntBASIC13.1□□□□□ -0.31
SCXQ7RTU7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 AC098590.1-201ENST00000468126 897 ntBASIC13.1□□□□□ -0.31
SCXQ7RTU7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 UNC93B5-201ENST00000530315 699 ntBASIC13.1□□□□□ -0.31
SCXQ7RTU7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms