Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 KRT17P3-201ENST00000420566 1262 ntBASIC19.11■□□□□ 0.65
RNF44Q7L0R7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 AC069544.1-201ENST00000609399 999 ntBASIC19.11■□□□□ 0.65
RNF44Q7L0R7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF44Q7L0R7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 KRT18P29-201ENST00000397031 1267 ntBASIC19.1■□□□□ 0.65
RNF44Q7L0R7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF44Q7L0R7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 TMEM191A-211ENST00000637163 1067 ntBASIC19.09■□□□□ 0.65
RNF44Q7L0R7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF44Q7L0R7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF44Q7L0R7 PRORSD1P-201ENST00000295112 541 ntBASIC19.08■□□□□ 0.64
RNF44Q7L0R7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 AC233263.1-201ENST00000578059 224 ntBASIC19.08■□□□□ 0.64
RNF44Q7L0R7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF44Q7L0R7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.07■□□□□ 0.64
RNF44Q7L0R7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF44Q7L0R7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF44Q7L0R7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF44Q7L0R7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RNF44Q7L0R7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms