Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 AC099398.1-201ENST00000567919 2776 ntBASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00173Q6ZV60 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 AC010525.1-201ENST00000585559 441 ntBASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00173Q6ZV60 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 NOC2LP2-201ENST00000407594 1944 ntBASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 MIR3181-201ENST00000578512 73 ntBASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00173Q6ZV60 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 TSPY9P-201ENST00000440215 945 ntBASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 TSPY11P-201ENST00000442607 1045 ntBASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 AC099791.2-201ENST00000605725 427 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms