Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF111Q6ZNA4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF111Q6ZNA4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF111Q6ZNA4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF111Q6ZNA4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 AC231657.2-201ENST00000624556 255 ntBASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 AC073111.5-205ENST00000641717 521 ntBASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF111Q6ZNA4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF111Q6ZNA4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 AC007322.1-201ENST00000426983 750 ntBASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF111Q6ZNA4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 AC092720.2-201ENST00000602388 1665 ntBASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 AC007322.4-201ENST00000509611 723 ntBASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms