Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 AL390719.1-204ENST00000412397 1219 ntBASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFWD3Q6PCD5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.77■□□□□ 0.91
RFWD3Q6PCD5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RFWD3Q6PCD5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RFWD3Q6PCD5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.77■□□□□ 0.91
RFWD3Q6PCD5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RFWD3Q6PCD5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 PTBP1P-201ENST00000554374 1601 ntBASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 AC098590.1-201ENST00000468126 897 ntBASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
RFWD3Q6PCD5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.75■□□□□ 0.91
RFWD3Q6PCD5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 DPP3P2-201ENST00000416030 1696 ntBASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 AC092720.2-201ENST00000602388 1665 ntBASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 KRT17P3-201ENST00000420566 1262 ntBASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
RFWD3Q6PCD5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 POM121L13P-201ENST00000422362 380 ntBASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 AC023632.3-201ENST00000521633 145 ntBASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 AC120498.8-201ENST00000614275 531 ntBASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFWD3Q6PCD5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms