Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DENND1BQ6P3S1 KRT16P6-202ENST00000425692 1426 ntBASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DENND1BQ6P3S1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DENND1BQ6P3S1 SLC25A24-204ENST00000569674 2357 ntBASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 AL390719.1-204ENST00000412397 1219 ntBASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DENND1BQ6P3S1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AFG3L1P-217ENST00000557444 2447 ntBASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DENND1BQ6P3S1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DENND1BQ6P3S1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.08■□□□□ 0.97
DENND1BQ6P3S1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DENND1BQ6P3S1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.08■□□□□ 0.97
DENND1BQ6P3S1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DENND1BQ6P3S1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms