Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 NUDT16P1-203ENST00000513809 620 ntBASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 REXO1L10P-201ENST00000615707 1290 ntBASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRPF40BQ6NWY9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 PKD1P6-201ENST00000343738 4769 ntBASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
PRPF40BQ6NWY9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
PRPF40BQ6NWY9 KRT18P57-201ENST00000443599 1254 ntBASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PRPF40BQ6NWY9 UNC93B2-201ENST00000285383 730 ntBASIC25■■□□□ 1.59
PRPF40BQ6NWY9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 AC113347.1-201ENST00000413321 391 ntBASIC25■■□□□ 1.59
PRPF40BQ6NWY9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25■■□□□ 1.59
PRPF40BQ6NWY9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 MIR1238-201ENST00000408483 83 ntBASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 AC023632.3-201ENST00000521633 145 ntBASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PRPF40BQ6NWY9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 LINC01568-207ENST00000641790 1380 ntBASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.98■■□□□ 1.59
PRPF40BQ6NWY9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms