Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R3AQ6IN85 KRT16P6-202ENST00000425692 1426 ntBASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 SOX15-203ENST00000570788 1093 ntBASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 AC008403.3-201ENST00000598924 454 ntBASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R3AQ6IN85 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
PPP4R3AQ6IN85 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PPP4R3AQ6IN85 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PPP4R3AQ6IN85 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
PPP4R3AQ6IN85 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R3AQ6IN85 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 AC120498.8-201ENST00000614275 531 ntBASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R3AQ6IN85 AC073130.3-201ENST00000624389 2278 ntBASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 AC026366.1-201ENST00000488803 879 ntBASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 AP003097.1-201ENST00000530657 1135 ntBASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 AC008687.6-201ENST00000596318 630 ntBASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R3AQ6IN85 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 AL391422.3-201ENST00000603791 2761 ntBASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms