Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 AC110285.5-201ENST00000611501 352 ntBASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 MIR718-201ENST00000390190 70 ntBASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF17Q5VTA0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF17Q5VTA0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF17Q5VTA0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF17Q5VTA0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms