Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 AL158211.5-201ENST00000623583 2518 ntBASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 TNXA-203ENST00000507684 2038 ntBASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 AC068338.2-201ENST00000563278 1430 ntBASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 RAP2CP1-201ENST00000605103 478 ntBASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 FAM21FP-204ENST00000608637 956 ntBASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATPAF1Q5TC12 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 AC007322.3-201ENST00000426526 701 ntBASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 AC026185.1-201ENST00000445748 174 ntBASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATPAF1Q5TC12 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.22■□□□□ 0.35
ATPAF1Q5TC12 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms