Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 KRT18P20-201ENST00000548986 1279 ntBASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 AC093503.3-201ENST00000624917 2352 ntBASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00242Q5T6M2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00242Q5T6M2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 AC008406.3-201ENST00000620001 1374 ntBASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 PGM5P4-201ENST00000421970 445 ntBASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 AL031432.3-201ENST00000607698 485 ntBASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 AC131212.1-201ENST00000613771 668 ntBASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00242Q5T6M2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00242Q5T6M2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms