Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 KRT18P68-201ENST00000392293 1000 ntBASIC19.35■□□□□ 0.69
SGO1Q5FBB7 AC004911.1-201ENST00000416316 871 ntBASIC19.35■□□□□ 0.69
SGO1Q5FBB7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGO1Q5FBB7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 AC231657.2-201ENST00000624556 255 ntBASIC19.34■□□□□ 0.69
SGO1Q5FBB7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGO1Q5FBB7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SGO1Q5FBB7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.33■□□□□ 0.68
SGO1Q5FBB7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SGO1Q5FBB7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 AC125437.2-201ENST00000625180 2167 ntBASIC19.32■□□□□ 0.68
SGO1Q5FBB7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 MIR935-201ENST00000401179 91 ntBASIC19.32■□□□□ 0.68
SGO1Q5FBB7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 AC100791.3-201ENST00000617619 330 ntBASIC19.32■□□□□ 0.68
SGO1Q5FBB7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 AL158211.5-201ENST00000623583 2518 ntBASIC19.32■□□□□ 0.68
SGO1Q5FBB7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
SGO1Q5FBB7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SGO1Q5FBB7 CYP2T3P-201ENST00000601990 817 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms