Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LINC01568-207ENST00000641790 1380 ntBASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 TERF1P1-201ENST00000311003 1181 ntBASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 KRT18P57-201ENST00000443599 1254 ntBASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 NBPF21P-201ENST00000425093 1451 ntBASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.36■■□□□ 1.01
CTC1Q2NKJ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTC1Q2NKJ3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 AL031963.3-201ENST00000606441 850 ntBASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTC1Q2NKJ3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 MIR1238-201ENST00000408483 83 ntBASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CTC1Q2NKJ3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.33■■□□□ 1
CTC1Q2NKJ3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CTC1Q2NKJ3 CYP2D8P-201ENST00000433633 1490 ntBASIC21.32■■□□□ 1
CTC1Q2NKJ3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 KRT18P22-201ENST00000402024 1347 ntBASIC21.32■■□□□ 1
CTC1Q2NKJ3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 LINC01521-201ENST00000504184 1943 ntBASIC21.32■■□□□ 1
CTC1Q2NKJ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CTC1Q2NKJ3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CTC1Q2NKJ3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.31■■□□□ 1
CTC1Q2NKJ3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms