Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 BX119927.1-201ENST00000636596 1552 ntBASIC15.58■□□□□ 0.09
CFHR3Q02985 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CFHR3Q02985 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.58■□□□□ 0.09
CFHR3Q02985 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.58■□□□□ 0.08
CFHR3Q02985 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.58■□□□□ 0.08
CFHR3Q02985 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CFHR3Q02985 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CFHR3Q02985 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CFHR3Q02985 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 KRT16P6-202ENST00000425692 1426 ntBASIC15.58■□□□□ 0.08
CFHR3Q02985 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 AL512408.1-201ENST00000569378 2000 ntBASIC15.58■□□□□ 0.08
CFHR3Q02985 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFHR3Q02985 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CFHR3Q02985 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CFHR3Q02985 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.57■□□□□ 0.08
CFHR3Q02985 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CFHR3Q02985 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.57■□□□□ 0.08
CFHR3Q02985 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.57■□□□□ 0.08
CFHR3Q02985 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.57■□□□□ 0.08
CFHR3Q02985 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CFHR3Q02985 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.57■□□□□ 0.08
CFHR3Q02985 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CFHR3Q02985 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.57■□□□□ 0.08
CFHR3Q02985 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CFHR3Q02985 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFHR3Q02985 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.56■□□□□ 0.08
CFHR3Q02985 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.56■□□□□ 0.08
CFHR3Q02985 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.56■□□□□ 0.08
CFHR3Q02985 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.56■□□□□ 0.08
CFHR3Q02985 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 AL121906.2-201ENST00000621597 723 ntBASIC15.56■□□□□ 0.08
CFHR3Q02985 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.56■□□□□ 0.08
CFHR3Q02985 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.56■□□□□ 0.08
CFHR3Q02985 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.56■□□□□ 0.08
CFHR3Q02985 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFHR3Q02985 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CFHR3Q02985 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CFHR3Q02985 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.55■□□□□ 0.08
CFHR3Q02985 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.55■□□□□ 0.08
CFHR3Q02985 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.55■□□□□ 0.08
CFHR3Q02985 AL359736.2-201ENST00000621992 437 ntBASIC15.55■□□□□ 0.08
CFHR3Q02985 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CFHR3Q02985 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CFHR3Q02985 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.54■□□□□ 0.08
CFHR3Q02985 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFHR3Q02985 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.54■□□□□ 0.08
CFHR3Q02985 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CFHR3Q02985 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.54■□□□□ 0.08
CFHR3Q02985 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CFHR3Q02985 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.54■□□□□ 0.08
CFHR3Q02985 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms