Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 BICD1-207ENST00000551848 1962 ntBASIC20.88■□□□□ 0.93
CBX1P83916 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CBX1P83916 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX1P83916 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CBX1P83916 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX1P83916 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.88■□□□□ 0.93
CBX1P83916 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CBX1P83916 AC084018.2-201ENST00000613093 2607 ntBASIC20.88■□□□□ 0.93
CBX1P83916 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CBX1P83916 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CBX1P83916 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX1P83916 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 AC009831.1-201ENST00000580420 1582 ntBASIC20.87■□□□□ 0.93
CBX1P83916 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CBX1P83916 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX1P83916 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CBX1P83916 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CBX1P83916 AL691432.2-201ENST00000607222 2038 ntBASIC20.87■□□□□ 0.93
CBX1P83916 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX1P83916 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX1P83916 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CBX1P83916 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CBX1P83916 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 AC133552.2-201ENST00000619106 1032 ntBASIC20.85■□□□□ 0.93
CBX1P83916 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX1P83916 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX1P83916 AF131216.4-201ENST00000638924 1588 ntBASIC20.85■□□□□ 0.93
CBX1P83916 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
CBX1P83916 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX1P83916 AC087393.1-201ENST00000582896 145 ntBASIC20.84■□□□□ 0.93
CBX1P83916 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms