Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM6P62312 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM6P62312 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM6P62312 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM6P62312 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LSM6P62312 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LSM6P62312 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.5■□□□□ 0.39
LSM6P62312 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LSM6P62312 NCF1B-203ENST00000435988 1254 ntBASIC17.5■□□□□ 0.39
LSM6P62312 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LSM6P62312 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.5■□□□□ 0.39
LSM6P62312 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LSM6P62312 AC092118.2-201ENST00000613495 667 ntBASIC17.5■□□□□ 0.39
LSM6P62312 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LSM6P62312 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSM6P62312 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.49■□□□□ 0.39
LSM6P62312 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LSM6P62312 AP001271.2-201ENST00000624018 1556 ntBASIC17.49■□□□□ 0.39
LSM6P62312 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.49■□□□□ 0.39
LSM6P62312 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 SLC29A4P1-201ENST00000398760 971 ntBASIC17.49■□□□□ 0.39
LSM6P62312 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.49■□□□□ 0.39
LSM6P62312 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.49■□□□□ 0.39
LSM6P62312 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.49■□□□□ 0.39
LSM6P62312 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM6P62312 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM6P62312 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.49■□□□□ 0.39
LSM6P62312 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSM6P62312 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSM6P62312 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM6P62312 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM6P62312 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LSM6P62312 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LSM6P62312 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM6P62312 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM6P62312 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM6P62312 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
LSM6P62312 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM6P62312 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM6P62312 TSPY6P-201ENST00000448518 926 ntBASIC17.47■□□□□ 0.39
LSM6P62312 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM6P62312 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM6P62312 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM6P62312 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms