Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S1P61966 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
AP1S1P61966 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S1P61966 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
AP1S1P61966 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S1P61966 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S1P61966 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
AP1S1P61966 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.09■□□□□ 0.81
AP1S1P61966 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.09■□□□□ 0.81
AP1S1P61966 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AP1S1P61966 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.09■□□□□ 0.81
AP1S1P61966 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 KRT18P29-201ENST00000397031 1267 ntBASIC20.09■□□□□ 0.81
AP1S1P61966 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
AP1S1P61966 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 AL121829.2-201ENST00000620908 328 ntBASIC20.09■□□□□ 0.81
AP1S1P61966 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AP1S1P61966 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.09■□□□□ 0.81
AP1S1P61966 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP1S1P61966 AC124283.5-201ENST00000624661 1809 ntBASIC20.09■□□□□ 0.81
AP1S1P61966 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
AP1S1P61966 AC099778.1-201ENST00000568593 1911 ntBASIC20.08■□□□□ 0.81
AP1S1P61966 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP1S1P61966 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP1S1P61966 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP1S1P61966 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.08■□□□□ 0.81
AP1S1P61966 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
AP1S1P61966 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP1S1P61966 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.08■□□□□ 0.81
AP1S1P61966 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP1S1P61966 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.08■□□□□ 0.81
AP1S1P61966 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.08■□□□□ 0.8
AP1S1P61966 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
AP1S1P61966 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
AP1S1P61966 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP1S1P61966 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP1S1P61966 PHGDH-210ENST00000641115 1638 ntBASIC20.08■□□□□ 0.8
AP1S1P61966 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.08■□□□□ 0.8
AP1S1P61966 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP1S1P61966 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
AP1S1P61966 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
AP1S1P61966 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.07■□□□□ 0.8
AP1S1P61966 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.07■□□□□ 0.8
AP1S1P61966 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.07■□□□□ 0.8
AP1S1P61966 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.07■□□□□ 0.8
AP1S1P61966 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
AP1S1P61966 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.07■□□□□ 0.8
AP1S1P61966 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.07■□□□□ 0.8
AP1S1P61966 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S1P61966 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
AP1S1P61966 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.06■□□□□ 0.8
AP1S1P61966 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.06■□□□□ 0.8
AP1S1P61966 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.06■□□□□ 0.8
AP1S1P61966 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP1S1P61966 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
AP1S1P61966 AC233263.1-201ENST00000578059 224 ntBASIC20.06■□□□□ 0.8
AP1S1P61966 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
AP1S1P61966 AC116351.2-201ENST00000606540 1585 ntBASIC20.06■□□□□ 0.8
AP1S1P61966 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.06■□□□□ 0.8
AP1S1P61966 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP1S1P61966 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S1P61966 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.06■□□□□ 0.8
AP1S1P61966 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms