Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN20P56880 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN20P56880 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN20P56880 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN20P56880 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLDN20P56880 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
CLDN20P56880 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN20P56880 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 MIR4651-201ENST00000582622 73 ntBASIC18.24■□□□□ 0.51
CLDN20P56880 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN20P56880 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN20P56880 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 BX323043.1-201ENST00000641006 1765 ntBASIC18.24■□□□□ 0.51
CLDN20P56880 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN20P56880 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CLDN20P56880 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN20P56880 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN20P56880 AC018445.3-201ENST00000624177 1945 ntBASIC18.23■□□□□ 0.51
CLDN20P56880 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN20P56880 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN20P56880 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN20P56880 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN20P56880 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN20P56880 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN20P56880 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN20P56880 SMG8-203ENST00000578922 2178 ntBASIC18.23■□□□□ 0.51
CLDN20P56880 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN20P56880 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.22■□□□□ 0.51
CLDN20P56880 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN20P56880 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN20P56880 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN20P56880 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN20P56880 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN20P56880 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLDN20P56880 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN20P56880 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN20P56880 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN20P56880 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms