Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN8P56748 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN8P56748 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN8P56748 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN8P56748 AC069236.1-201ENST00000604339 616 ntBASIC18.95■□□□□ 0.62
CLDN8P56748 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN8P56748 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN8P56748 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN8P56748 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN8P56748 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN8P56748 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN8P56748 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN8P56748 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN8P56748 AC018445.3-201ENST00000624177 1945 ntBASIC18.94■□□□□ 0.62
CLDN8P56748 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN8P56748 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN8P56748 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN8P56748 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN8P56748 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN8P56748 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN8P56748 AP001271.2-201ENST00000624018 1556 ntBASIC18.93■□□□□ 0.62
CLDN8P56748 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN8P56748 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 CYP2T1P-201ENST00000432607 1285 ntBASIC18.93■□□□□ 0.62
CLDN8P56748 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.93■□□□□ 0.62
CLDN8P56748 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN8P56748 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN8P56748 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN8P56748 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN8P56748 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLDN8P56748 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN8P56748 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN8P56748 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN8P56748 HLA-G-202ENST00000376815 851 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 HLA-G-203ENST00000376818 1127 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN8P56748 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN8P56748 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN8P56748 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 AC231657.2-201ENST00000624556 255 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 AC008694.1-202ENST00000636953 945 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 AC087289.5-201ENST00000586076 3175 ntBASIC18.92■□□□□ 0.62
CLDN8P56748 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN8P56748 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.92■□□□□ 0.62
CLDN8P56748 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN8P56748 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN8P56748 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN8P56748 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLDN8P56748 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN8P56748 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN8P56748 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN8P56748 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN8P56748 AL355472.2-201ENST00000422958 438 ntBASIC18.91■□□□□ 0.62
CLDN8P56748 AC026271.2-201ENST00000428091 497 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms