Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 HLA-G-202ENST00000376815 851 ntBASIC25.41■■□□□ 1.66
COL15A1P39059 HLA-G-203ENST00000376818 1127 ntBASIC25.41■■□□□ 1.66
COL15A1P39059 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.41■■□□□ 1.66
COL15A1P39059 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.41■■□□□ 1.66
COL15A1P39059 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.41■■□□□ 1.66
COL15A1P39059 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.41■■□□□ 1.66
COL15A1P39059 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.41■■□□□ 1.66
COL15A1P39059 CR392000.1-201ENST00000624770 1228 ntBASIC25.41■■□□□ 1.66
COL15A1P39059 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.41■■□□□ 1.66
COL15A1P39059 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL15A1P39059 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
COL15A1P39059 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL15A1P39059 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL15A1P39059 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL15A1P39059 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.4■■□□□ 1.66
COL15A1P39059 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL15A1P39059 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL15A1P39059 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL15A1P39059 TERF1P1-201ENST00000311003 1181 ntBASIC25.4■■□□□ 1.66
COL15A1P39059 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.4■■□□□ 1.66
COL15A1P39059 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.4■■□□□ 1.66
COL15A1P39059 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.4■■□□□ 1.66
COL15A1P39059 NAPSB-206ENST00000562112 1266 ntBASIC25.4■■□□□ 1.66
COL15A1P39059 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.4■■□□□ 1.66
COL15A1P39059 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.4■■□□□ 1.66
COL15A1P39059 AC010947.1-201ENST00000623454 693 ntBASIC25.4■■□□□ 1.66
COL15A1P39059 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.39■■□□□ 1.66
COL15A1P39059 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
COL15A1P39059 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL15A1P39059 ARMC10P1-201ENST00000313754 855 ntBASIC25.39■■□□□ 1.65
COL15A1P39059 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.39■■□□□ 1.65
COL15A1P39059 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.39■■□□□ 1.65
COL15A1P39059 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.39■■□□□ 1.65
COL15A1P39059 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL15A1P39059 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL15A1P39059 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.39■■□□□ 1.65
COL15A1P39059 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.39■■□□□ 1.65
COL15A1P39059 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.39■■□□□ 1.65
COL15A1P39059 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.39■■□□□ 1.65
COL15A1P39059 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.39■■□□□ 1.65
COL15A1P39059 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL15A1P39059 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL15A1P39059 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.39■■□□□ 1.65
COL15A1P39059 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.38■■□□□ 1.65
COL15A1P39059 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.38■■□□□ 1.65
COL15A1P39059 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.38■■□□□ 1.65
COL15A1P39059 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.38■■□□□ 1.65
COL15A1P39059 AL590326.2-201ENST00000625139 305 ntBASIC25.38■■□□□ 1.65
COL15A1P39059 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL15A1P39059 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.37■■□□□ 1.65
COL15A1P39059 KRT8P20-201ENST00000423953 1409 ntBASIC25.37■■□□□ 1.65
COL15A1P39059 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL15A1P39059 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
COL15A1P39059 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.37■■□□□ 1.65
COL15A1P39059 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.37■■□□□ 1.65
COL15A1P39059 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL15A1P39059 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
COL15A1P39059 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.37■■□□□ 1.65
COL15A1P39059 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
COL15A1P39059 AC006128.1-201ENST00000624704 1661 ntBASIC25.37■■□□□ 1.65
COL15A1P39059 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
COL15A1P39059 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.37■■□□□ 1.65
COL15A1P39059 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
COL15A1P39059 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.37■■□□□ 1.65
COL15A1P39059 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.36■■□□□ 1.65
COL15A1P39059 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.36■■□□□ 1.65
COL15A1P39059 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.36■■□□□ 1.65
COL15A1P39059 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.36■■□□□ 1.65
COL15A1P39059 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL15A1P39059 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.36■■□□□ 1.65
COL15A1P39059 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.35■■□□□ 1.65
COL15A1P39059 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 SLC25A3P1-201ENST00000443844 931 ntBASIC25.35■■□□□ 1.65
COL15A1P39059 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.35■■□□□ 1.65
COL15A1P39059 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.35■■□□□ 1.65
COL15A1P39059 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL15A1P39059 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms