Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT20P35900 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT20P35900 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT20P35900 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KRT20P35900 SMG8-203ENST00000578922 2178 ntBASIC18.89■□□□□ 0.62
KRT20P35900 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 AC133552.2-202ENST00000575694 574 ntBASIC18.89■□□□□ 0.61
KRT20P35900 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 RAP2CP1-201ENST00000605103 478 ntBASIC18.89■□□□□ 0.61
KRT20P35900 AC100791.3-201ENST00000617619 330 ntBASIC18.89■□□□□ 0.61
KRT20P35900 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT20P35900 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT20P35900 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT20P35900 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT20P35900 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT20P35900 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 HCG11-201ENST00000411553 5696 ntBASIC18.88■□□□□ 0.61
KRT20P35900 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 MCRIP2P1-201ENST00000394346 511 ntBASIC18.88■□□□□ 0.61
KRT20P35900 CROCCP5-201ENST00000436658 830 ntBASIC18.88■□□□□ 0.61
KRT20P35900 AC090192.1-201ENST00000517740 490 ntBASIC18.88■□□□□ 0.61
KRT20P35900 AC105036.2-201ENST00000569468 176 ntBASIC18.88■□□□□ 0.61
KRT20P35900 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT20P35900 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT20P35900 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KRT20P35900 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT20P35900 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT20P35900 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
KRT20P35900 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT20P35900 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT20P35900 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.87■□□□□ 0.61
KRT20P35900 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 AL512625.2-201ENST00000417533 625 ntBASIC18.87■□□□□ 0.61
KRT20P35900 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT20P35900 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT20P35900 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.87■□□□□ 0.61
KRT20P35900 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KRT20P35900 AL121832.2-201ENST00000610979 668 ntBASIC18.87■□□□□ 0.61
KRT20P35900 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT20P35900 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT20P35900 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT20P35900 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT20P35900 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT20P35900 CYP21A1P-202ENST00000354927 1481 ntBASIC18.86■□□□□ 0.61
KRT20P35900 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KRT20P35900 SLC29A4P1-201ENST00000398760 971 ntBASIC18.86■□□□□ 0.61
KRT20P35900 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT20P35900 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT20P35900 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.86■□□□□ 0.61
KRT20P35900 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT20P35900 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.86■□□□□ 0.61
KRT20P35900 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
KRT20P35900 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.86■□□□□ 0.61
KRT20P35900 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms