Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CLCN1P35523 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.61■■□□□ 1.21
CLCN1P35523 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CLCN1P35523 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.61■■□□□ 1.21
CLCN1P35523 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCN1P35523 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.61■■□□□ 1.21
CLCN1P35523 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CLCN1P35523 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.61■■□□□ 1.21
CLCN1P35523 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLCN1P35523 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.6■■□□□ 1.21
CLCN1P35523 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CLCN1P35523 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CLCN1P35523 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.6■■□□□ 1.21
CLCN1P35523 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CLCN1P35523 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.6■■□□□ 1.21
CLCN1P35523 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLCN1P35523 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CLCN1P35523 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.59■■□□□ 1.21
CLCN1P35523 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
CLCN1P35523 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.59■■□□□ 1.21
CLCN1P35523 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CLCN1P35523 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLCN1P35523 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.59■■□□□ 1.21
CLCN1P35523 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
CLCN1P35523 AC009113.1-201ENST00000570267 2443 ntBASIC22.59■■□□□ 1.21
CLCN1P35523 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.58■■□□□ 1.21
CLCN1P35523 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLCN1P35523 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.58■■□□□ 1.21
CLCN1P35523 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.58■■□□□ 1.21
CLCN1P35523 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.58■■□□□ 1.21
CLCN1P35523 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 AC104581.1-202ENST00000635932 2618 ntBASIC22.58■■□□□ 1.21
CLCN1P35523 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.58■■□□□ 1.21
CLCN1P35523 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLCN1P35523 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.58■■□□□ 1.21
CLCN1P35523 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLCN1P35523 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN1P35523 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.58■■□□□ 1.2
CLCN1P35523 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN1P35523 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN1P35523 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLCN1P35523 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN1P35523 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CLCN1P35523 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN1P35523 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.57■■□□□ 1.2
CLCN1P35523 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.57■■□□□ 1.2
CLCN1P35523 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN1P35523 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN1P35523 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN1P35523 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN1P35523 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN1P35523 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN1P35523 NOC2LP2-201ENST00000407594 1944 ntBASIC22.57■■□□□ 1.2
CLCN1P35523 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLCN1P35523 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.57■■□□□ 1.2
CLCN1P35523 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CLCN1P35523 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
CLCN1P35523 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.56■■□□□ 1.2
CLCN1P35523 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCN1P35523 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.56■■□□□ 1.2
CLCN1P35523 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.56■■□□□ 1.2
CLCN1P35523 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms