Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MIPEPP3-201ENST00000412105 444 ntBASIC20.98■□□□□ 0.95
CHRNA3P32297 CDV3P1-201ENST00000471403 739 ntBASIC20.98■□□□□ 0.95
CHRNA3P32297 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.98■□□□□ 0.95
CHRNA3P32297 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CHRNA3P32297 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA3P32297 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA3P32297 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA3P32297 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNA3P32297 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
CHRNA3P32297 RNF165-205ENST00000588679 2904 ntBASIC20.97■□□□□ 0.95
CHRNA3P32297 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CHRNA3P32297 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.97■□□□□ 0.95
CHRNA3P32297 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNA3P32297 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
CHRNA3P32297 AC018445.3-201ENST00000624177 1945 ntBASIC20.96■□□□□ 0.95
CHRNA3P32297 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA3P32297 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA3P32297 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 AL691432.2-201ENST00000607222 2038 ntBASIC20.96■□□□□ 0.95
CHRNA3P32297 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHRNA3P32297 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CHRNA3P32297 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHRNA3P32297 AC069152.1-201ENST00000438030 544 ntBASIC20.96■□□□□ 0.95
CHRNA3P32297 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.96■□□□□ 0.95
CHRNA3P32297 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNA3P32297 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.96■□□□□ 0.95
CHRNA3P32297 FAM21FP-204ENST00000608637 956 ntBASIC20.96■□□□□ 0.95
CHRNA3P32297 AC133041.1-202ENST00000642053 222 ntBASIC20.96■□□□□ 0.95
CHRNA3P32297 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHRNA3P32297 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNA3P32297 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.96■□□□□ 0.95
CHRNA3P32297 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.96■□□□□ 0.95
CHRNA3P32297 AC010980.2-201ENST00000587099 1412 ntBASIC20.95■□□□□ 0.95
CHRNA3P32297 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 BX119927.1-201ENST00000636596 1552 ntBASIC20.95■□□□□ 0.94
CHRNA3P32297 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNA3P32297 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNA3P32297 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNA3P32297 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.95■□□□□ 0.94
CHRNA3P32297 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRNA3P32297 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNA3P32297 MIR4758-201ENST00000577688 71 ntBASIC20.95■□□□□ 0.94
CHRNA3P32297 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNA3P32297 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNA3P32297 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNA3P32297 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA3P32297 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHRNA3P32297 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHRNA3P32297 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA3P32297 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHRNA3P32297 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRNA3P32297 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNA3P32297 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNA3P32297 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNA3P32297 BX276092.2-201ENST00000417668 665 ntBASIC20.94■□□□□ 0.94
CHRNA3P32297 AC073210.2-201ENST00000430369 194 ntBASIC20.94■□□□□ 0.94
CHRNA3P32297 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.94■□□□□ 0.94
CHRNA3P32297 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CHRNA3P32297 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA3P32297 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA3P32297 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms