Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
COL8A2P25067 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.86■□□□□ 0.29
COL8A2P25067 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 HLA-G-202ENST00000376815 851 ntBASIC16.86■□□□□ 0.29
COL8A2P25067 HLA-G-203ENST00000376818 1127 ntBASIC16.86■□□□□ 0.29
COL8A2P25067 AC239809.2-201ENST00000415381 517 ntBASIC16.86■□□□□ 0.29
COL8A2P25067 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.86■□□□□ 0.29
COL8A2P25067 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.86■□□□□ 0.29
COL8A2P25067 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.86■□□□□ 0.29
COL8A2P25067 Z99916.2-201ENST00000604037 246 ntBASIC16.86■□□□□ 0.29
COL8A2P25067 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
COL8A2P25067 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.86■□□□□ 0.29
COL8A2P25067 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL8A2P25067 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
COL8A2P25067 DPP3P2-201ENST00000416030 1696 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL8A2P25067 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.85■□□□□ 0.29
COL8A2P25067 AC133681.1-201ENST00000465482 601 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.85■□□□□ 0.29
COL8A2P25067 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.85■□□□□ 0.29
COL8A2P25067 PRKY-204ENST00000533551 1019 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.85■□□□□ 0.29
COL8A2P25067 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL8A2P25067 AC110285.5-201ENST00000611501 352 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.85■□□□□ 0.29
COL8A2P25067 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.85■□□□□ 0.29
COL8A2P25067 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL8A2P25067 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.85■□□□□ 0.29
COL8A2P25067 KRT8P20-201ENST00000423953 1409 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.85■□□□□ 0.29
COL8A2P25067 KRT8P17-201ENST00000453110 1448 ntBASIC16.85■□□□□ 0.29
COL8A2P25067 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL8A2P25067 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.85■□□□□ 0.29
COL8A2P25067 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COL8A2P25067 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.84■□□□□ 0.29
COL8A2P25067 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL8A2P25067 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.84■□□□□ 0.29
COL8A2P25067 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COL8A2P25067 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.84■□□□□ 0.29
COL8A2P25067 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.84■□□□□ 0.29
COL8A2P25067 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.84■□□□□ 0.29
COL8A2P25067 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.84■□□□□ 0.29
COL8A2P25067 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 AC092720.2-201ENST00000602388 1665 ntBASIC16.84■□□□□ 0.29
COL8A2P25067 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL8A2P25067 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL8A2P25067 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL8A2P25067 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.83■□□□□ 0.28
COL8A2P25067 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL8A2P25067 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL8A2P25067 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
COL8A2P25067 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.83■□□□□ 0.28
COL8A2P25067 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.83■□□□□ 0.28
COL8A2P25067 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.83■□□□□ 0.28
COL8A2P25067 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL8A2P25067 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL8A2P25067 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL8A2P25067 AL031963.3-201ENST00000606441 850 ntBASIC16.83■□□□□ 0.28
COL8A2P25067 AL121829.2-201ENST00000620908 328 ntBASIC16.83■□□□□ 0.28
COL8A2P25067 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COL8A2P25067 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.82■□□□□ 0.28
COL8A2P25067 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.82■□□□□ 0.28
COL8A2P25067 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms