Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB3BP20337 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB3BP20337 AC099791.1-201ENST00000416440 715 ntBASIC17.44■□□□□ 0.38
RAB3BP20337 AC024257.2-201ENST00000549699 147 ntBASIC17.44■□□□□ 0.38
RAB3BP20337 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB3BP20337 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB3BP20337 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB3BP20337 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB3BP20337 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 LETM1P2-201ENST00000597330 2178 ntBASIC17.43■□□□□ 0.38
RAB3BP20337 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RAB3BP20337 AC138907.5-202ENST00000569484 235 ntBASIC17.43■□□□□ 0.38
RAB3BP20337 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.43■□□□□ 0.38
RAB3BP20337 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3BP20337 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3BP20337 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RAB3BP20337 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB3BP20337 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
RAB3BP20337 AL136162.1-201ENST00000607711 1078 ntBASIC17.42■□□□□ 0.38
RAB3BP20337 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RAB3BP20337 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 KRT87P-202ENST00000534226 1464 ntBASIC17.42■□□□□ 0.38
RAB3BP20337 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3BP20337 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3BP20337 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3BP20337 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3BP20337 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB3BP20337 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB3BP20337 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB3BP20337 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3BP20337 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
RAB3BP20337 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RAB3BP20337 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB3BP20337 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3BP20337 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 AL032819.2-201ENST00000624543 2162 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3BP20337 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB3BP20337 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms