Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.17■□□□□ 0.18
DEFA4P12838 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DEFA4P12838 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
DEFA4P12838 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
DEFA4P12838 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.16■□□□□ 0.18
DEFA4P12838 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
DEFA4P12838 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.16■□□□□ 0.18
DEFA4P12838 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.16■□□□□ 0.18
DEFA4P12838 AC007322.3-201ENST00000426526 701 ntBASIC16.16■□□□□ 0.18
DEFA4P12838 CDV3P1-201ENST00000471403 739 ntBASIC16.16■□□□□ 0.18
DEFA4P12838 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.16■□□□□ 0.18
DEFA4P12838 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.16■□□□□ 0.18
DEFA4P12838 UBE2DNL-204ENST00000602536 740 ntBASIC16.16■□□□□ 0.18
DEFA4P12838 MIR6821-201ENST00000617625 74 ntBASIC16.16■□□□□ 0.18
DEFA4P12838 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.16■□□□□ 0.18
DEFA4P12838 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 AL158211.5-201ENST00000623583 2518 ntBASIC16.16■□□□□ 0.18
DEFA4P12838 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DEFA4P12838 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.16■□□□□ 0.18
DEFA4P12838 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DEFA4P12838 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DEFA4P12838 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.16■□□□□ 0.18
DEFA4P12838 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.16■□□□□ 0.18
DEFA4P12838 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.15■□□□□ 0.18
DEFA4P12838 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DEFA4P12838 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
DEFA4P12838 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DEFA4P12838 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
DEFA4P12838 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
DEFA4P12838 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
DEFA4P12838 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.15■□□□□ 0.18
DEFA4P12838 AC243732.1-201ENST00000612648 864 ntBASIC16.15■□□□□ 0.18
DEFA4P12838 RBM17P2-201ENST00000616397 1405 ntBASIC16.15■□□□□ 0.18
DEFA4P12838 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DEFA4P12838 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DEFA4P12838 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 AC019069.1-201ENST00000610008 1333 ntBASIC16.15■□□□□ 0.18
DEFA4P12838 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DEFA4P12838 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DEFA4P12838 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DEFA4P12838 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
DEFA4P12838 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DEFA4P12838 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DEFA4P12838 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 TCF3P1-201ENST00000423021 1937 ntBASIC16.14■□□□□ 0.17
DEFA4P12838 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.14■□□□□ 0.17
DEFA4P12838 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.14■□□□□ 0.17
DEFA4P12838 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.14■□□□□ 0.17
DEFA4P12838 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
DEFA4P12838 MYCNOS-205ENST00000641950 531 ntBASIC16.14■□□□□ 0.17
DEFA4P12838 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.14■□□□□ 0.17
DEFA4P12838 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.14■□□□□ 0.17
DEFA4P12838 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
DEFA4P12838 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.14■□□□□ 0.17
DEFA4P12838 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DEFA4P12838 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
DEFA4P12838 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DEFA4P12838 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DEFA4P12838 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 AC125437.2-201ENST00000625180 2167 ntBASIC16.13■□□□□ 0.17
DEFA4P12838 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DEFA4P12838 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms