Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 MIR2861-201ENST00000636310 90 ntBASIC17.88■□□□□ 0.45
HLA-DPB1P04440 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 AC093484.2-201ENST00000580996 2166 ntBASIC17.88■□□□□ 0.45
HLA-DPB1P04440 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DPB1P04440 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 SLC7A5P2-201ENST00000553010 536 ntBASIC17.87■□□□□ 0.45
HLA-DPB1P04440 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HLA-DPB1P04440 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 POU5F1P4-201ENST00000413175 1085 ntBASIC17.86■□□□□ 0.45
HLA-DPB1P04440 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPB1P04440 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPB1P04440 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPB1P04440 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms