Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV3P03979 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV3P03979 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRGV3P03979 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV3P03979 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.67■□□□□ 0.1
TRGV3P03979 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.67■□□□□ 0.1
TRGV3P03979 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.67■□□□□ 0.1
TRGV3P03979 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.67■□□□□ 0.1
TRGV3P03979 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.67■□□□□ 0.1
TRGV3P03979 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRGV3P03979 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 AC092368.3-202ENST00000574180 1591 ntBASIC15.66■□□□□ 0.1
TRGV3P03979 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV3P03979 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.66■□□□□ 0.1
TRGV3P03979 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.66■□□□□ 0.1
TRGV3P03979 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 AL031963.3-201ENST00000606441 850 ntBASIC15.66■□□□□ 0.1
TRGV3P03979 HCG11-201ENST00000411553 5696 ntBASIC15.66■□□□□ 0.1
TRGV3P03979 AL512408.1-201ENST00000569378 2000 ntBASIC15.66■□□□□ 0.1
TRGV3P03979 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.66■□□□□ 0.1
TRGV3P03979 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV3P03979 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 KRT8P20-201ENST00000423953 1409 ntBASIC15.66■□□□□ 0.1
TRGV3P03979 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV3P03979 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.66■□□□□ 0.1
TRGV3P03979 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRGV3P03979 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV3P03979 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRGV3P03979 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRGV3P03979 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRGV3P03979 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV3P03979 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.65■□□□□ 0.1
TRGV3P03979 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRGV3P03979 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.65■□□□□ 0.1
TRGV3P03979 RNA5SP413-201ENST00000516373 109 ntBASIC15.65■□□□□ 0.1
TRGV3P03979 AC023632.3-201ENST00000521633 145 ntBASIC15.65■□□□□ 0.1
TRGV3P03979 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.65■□□□□ 0.1
TRGV3P03979 AC060766.5-201ENST00000590539 871 ntBASIC15.65■□□□□ 0.1
TRGV3P03979 HLA-B-256ENST00000639848 1089 ntBASIC15.65■□□□□ 0.1
TRGV3P03979 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV3P03979 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRGV3P03979 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 KRT8P17-201ENST00000453110 1448 ntBASIC15.65■□□□□ 0.1
TRGV3P03979 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.65■□□□□ 0.1
TRGV3P03979 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.65■□□□□ 0.1
TRGV3P03979 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRGV3P03979 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
TRGV3P03979 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRGV3P03979 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms