Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1O96005 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.76■□□□□ 0.59
CLPTM1O96005 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.76■□□□□ 0.59
CLPTM1O96005 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.76■□□□□ 0.59
CLPTM1O96005 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPTM1O96005 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.76■□□□□ 0.59
CLPTM1O96005 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLPTM1O96005 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLPTM1O96005 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPTM1O96005 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPTM1O96005 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPTM1O96005 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPTM1O96005 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.74■□□□□ 0.59
CLPTM1O96005 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLPTM1O96005 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPTM1O96005 IRS3P-201ENST00000223076 1006 ntBASIC18.74■□□□□ 0.59
CLPTM1O96005 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.74■□□□□ 0.59
CLPTM1O96005 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
CLPTM1O96005 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPTM1O96005 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.74■□□□□ 0.59
CLPTM1O96005 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPTM1O96005 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPTM1O96005 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLPTM1O96005 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPTM1O96005 PCDHB18P-201ENST00000524813 2368 ntBASIC18.74■□□□□ 0.59
CLPTM1O96005 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPTM1O96005 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLPTM1O96005 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPTM1O96005 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.73■□□□□ 0.59
CLPTM1O96005 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.73■□□□□ 0.59
CLPTM1O96005 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPTM1O96005 AC068587.7-201ENST00000641602 218 ntBASIC18.73■□□□□ 0.59
CLPTM1O96005 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPTM1O96005 AC018470.1-201ENST00000624790 3129 ntBASIC18.73■□□□□ 0.59
CLPTM1O96005 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CLPTM1O96005 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPTM1O96005 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPTM1O96005 AL032819.2-201ENST00000624543 2162 ntBASIC18.72■□□□□ 0.59
CLPTM1O96005 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.72■□□□□ 0.59
CLPTM1O96005 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLPTM1O96005 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1O96005 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms