Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LSM8O95777 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.06■□□□□ 0.96
LSM8O95777 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LSM8O95777 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.06■□□□□ 0.96
LSM8O95777 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 AL390719.1-204ENST00000412397 1219 ntBASIC21.06■□□□□ 0.96
LSM8O95777 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 PHGDH-210ENST00000641115 1638 ntBASIC21.06■□□□□ 0.96
LSM8O95777 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LSM8O95777 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM8O95777 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM8O95777 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 AC098934.4-201ENST00000564127 592 ntBASIC21.05■□□□□ 0.96
LSM8O95777 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 HLA-B-256ENST00000639848 1089 ntBASIC21.05■□□□□ 0.96
LSM8O95777 AC133041.1-202ENST00000642053 222 ntBASIC21.05■□□□□ 0.96
LSM8O95777 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM8O95777 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.05■□□□□ 0.96
LSM8O95777 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM8O95777 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM8O95777 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LSM8O95777 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.04■□□□□ 0.96
LSM8O95777 AC069152.1-201ENST00000438030 544 ntBASIC21.04■□□□□ 0.96
LSM8O95777 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LSM8O95777 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM8O95777 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM8O95777 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LSM8O95777 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LSM8O95777 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.04■□□□□ 0.96
LSM8O95777 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.04■□□□□ 0.96
LSM8O95777 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM8O95777 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
LSM8O95777 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LSM8O95777 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.03■□□□□ 0.96
LSM8O95777 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.03■□□□□ 0.96
LSM8O95777 AC083880.1-201ENST00000608266 535 ntBASIC21.03■□□□□ 0.96
LSM8O95777 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.03■□□□□ 0.96
LSM8O95777 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LSM8O95777 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM8O95777 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM8O95777 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.02■□□□□ 0.96
LSM8O95777 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSM8O95777 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM8O95777 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM8O95777 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LSM8O95777 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM8O95777 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LSM8O95777 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.02■□□□□ 0.96
LSM8O95777 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms