Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SOX30O94993 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX30O94993 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX30O94993 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SOX30O94993 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.53■□□□□ 0.56
SOX30O94993 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 AC073210.2-201ENST00000430369 194 ntBASIC18.53■□□□□ 0.56
SOX30O94993 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 NCF1B-203ENST00000435988 1254 ntBASIC18.53■□□□□ 0.56
SOX30O94993 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.53■□□□□ 0.56
SOX30O94993 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.53■□□□□ 0.56
SOX30O94993 MIR4758-201ENST00000577688 71 ntBASIC18.53■□□□□ 0.56
SOX30O94993 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
SOX30O94993 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SOX30O94993 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOX30O94993 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.53■□□□□ 0.56
SOX30O94993 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.52■□□□□ 0.56
SOX30O94993 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 AC009237.14-201ENST00000609975 1594 ntBASIC18.52■□□□□ 0.56
SOX30O94993 AP001271.2-201ENST00000624018 1556 ntBASIC18.52■□□□□ 0.56
SOX30O94993 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 GPX1P1-201ENST00000388829 606 ntBASIC18.52■□□□□ 0.56
SOX30O94993 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SOX30O94993 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.52■□□□□ 0.56
SOX30O94993 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.52■□□□□ 0.56
SOX30O94993 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.52■□□□□ 0.56
SOX30O94993 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.52■□□□□ 0.56
SOX30O94993 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SOX30O94993 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOX30O94993 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SOX30O94993 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
SOX30O94993 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SOX30O94993 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
SOX30O94993 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.51■□□□□ 0.55
SOX30O94993 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.51■□□□□ 0.55
SOX30O94993 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 PCDHAC2-203ENST00000615316 3011 ntBASIC18.51■□□□□ 0.55
SOX30O94993 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SOX30O94993 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.51■□□□□ 0.55
SOX30O94993 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.51■□□□□ 0.55
SOX30O94993 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 MIPEPP3-201ENST00000412105 444 ntBASIC18.51■□□□□ 0.55
SOX30O94993 AL390719.1-204ENST00000412397 1219 ntBASIC18.51■□□□□ 0.55
SOX30O94993 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.51■□□□□ 0.55
SOX30O94993 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.51■□□□□ 0.55
SOX30O94993 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SOX30O94993 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOX30O94993 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SOX30O94993 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.5■□□□□ 0.55
SOX30O94993 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SOX30O94993 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX30O94993 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SOX30O94993 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SOX30O94993 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.5■□□□□ 0.55
SOX30O94993 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms