Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
LTN1O94822 PPP1R14BP5-201ENST00000440334 435 ntBASIC26.62■■□□□ 1.85
LTN1O94822 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC26.62■■□□□ 1.85
LTN1O94822 B3GAT3P1-201ENST00000471720 806 ntBASIC26.62■■□□□ 1.85
LTN1O94822 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.62■■□□□ 1.85
LTN1O94822 AC073508.3-201ENST00000619697 1419 ntBASIC26.62■■□□□ 1.85
LTN1O94822 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26.62■■□□□ 1.85
LTN1O94822 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.62■■□□□ 1.85
LTN1O94822 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LTN1O94822 FP700111.2-201ENST00000619190 1892 ntBASIC26.62■■□□□ 1.85
LTN1O94822 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.61■■□□□ 1.85
LTN1O94822 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.61■■□□□ 1.85
LTN1O94822 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.61■■□□□ 1.85
LTN1O94822 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.61■■□□□ 1.85
LTN1O94822 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
LTN1O94822 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.61■■□□□ 1.85
LTN1O94822 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.61■■□□□ 1.85
LTN1O94822 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC26.61■■□□□ 1.85
LTN1O94822 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LTN1O94822 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
LTN1O94822 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.61■■□□□ 1.85
LTN1O94822 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
LTN1O94822 AC116351.2-201ENST00000606540 1585 ntBASIC26.6■■□□□ 1.85
LTN1O94822 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 PRR31-201ENST00000371629 978 ntTSL 2 BASIC26.6■■□□□ 1.85
LTN1O94822 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
LTN1O94822 AL445675.2-201ENST00000620291 557 ntBASIC26.6■■□□□ 1.85
LTN1O94822 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
LTN1O94822 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
LTN1O94822 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LTN1O94822 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.6■■□□□ 1.85
LTN1O94822 AC018553.1-201ENST00000616682 1458 ntBASIC26.59■■□□□ 1.85
LTN1O94822 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.59■■□□□ 1.85
LTN1O94822 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
LTN1O94822 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC26.59■■□□□ 1.85
LTN1O94822 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.59■■□□□ 1.85
LTN1O94822 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.59■■□□□ 1.85
LTN1O94822 AP006587.1-201ENST00000534129 1502 ntBASIC26.59■■□□□ 1.85
LTN1O94822 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LTN1O94822 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.58■■□□□ 1.85
LTN1O94822 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.58■■□□□ 1.85
LTN1O94822 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.58■■□□□ 1.85
LTN1O94822 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.58■■□□□ 1.85
LTN1O94822 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.58■■□□□ 1.85
LTN1O94822 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.58■■□□□ 1.85
LTN1O94822 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
LTN1O94822 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LTN1O94822 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
LTN1O94822 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LTN1O94822 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LTN1O94822 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
LTN1O94822 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LTN1O94822 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC26.57■■□□□ 1.84
LTN1O94822 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC26.57■■□□□ 1.84
LTN1O94822 PHGDH-210ENST00000641115 1638 ntBASIC26.57■■□□□ 1.84
LTN1O94822 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LTN1O94822 GOLGA6L3-201ENST00000507199 1679 ntBASIC26.57■■□□□ 1.84
LTN1O94822 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.57■■□□□ 1.84
LTN1O94822 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LTN1O94822 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LTN1O94822 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC26.56■■□□□ 1.84
LTN1O94822 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.56■■□□□ 1.84
LTN1O94822 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LTN1O94822 TFP1-202ENST00000475455 1573 ntBASIC26.56■■□□□ 1.84
LTN1O94822 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.56■■□□□ 1.84
LTN1O94822 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.56■■□□□ 1.84
LTN1O94822 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms