Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN11O75508 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 AL359736.2-201ENST00000621992 437 ntBASIC20.39■□□□□ 0.85
CLDN11O75508 LINC01006-201ENST00000333319 2292 ntBASIC20.39■□□□□ 0.85
CLDN11O75508 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CLDN11O75508 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN11O75508 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLDN11O75508 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN11O75508 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLDN11O75508 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN11O75508 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLDN11O75508 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN11O75508 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 AC239809.2-201ENST00000415381 517 ntBASIC20.38■□□□□ 0.85
CLDN11O75508 AL158047.1-201ENST00000445918 881 ntBASIC20.38■□□□□ 0.85
CLDN11O75508 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN11O75508 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLDN11O75508 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN11O75508 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 AL023875.1-201ENST00000640777 796 ntBASIC20.38■□□□□ 0.85
CLDN11O75508 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CLDN11O75508 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN11O75508 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN11O75508 AL157384.1-201ENST00000445995 2473 ntBASIC20.37■□□□□ 0.85
CLDN11O75508 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN11O75508 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLDN11O75508 AC133681.1-201ENST00000465482 601 ntBASIC20.37■□□□□ 0.85
CLDN11O75508 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLDN11O75508 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN11O75508 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN11O75508 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN11O75508 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN11O75508 PHGDH-210ENST00000641115 1638 ntBASIC20.37■□□□□ 0.85
CLDN11O75508 AC116351.2-201ENST00000606540 1585 ntBASIC20.37■□□□□ 0.85
CLDN11O75508 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN11O75508 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.37■□□□□ 0.85
CLDN11O75508 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN11O75508 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CLDN11O75508 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.36■□□□□ 0.85
CLDN11O75508 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 AC124016.1-201ENST00000609552 612 ntBASIC20.36■□□□□ 0.85
CLDN11O75508 FAM197Y4-202ENST00000622692 608 ntBASIC20.36■□□□□ 0.85
CLDN11O75508 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CLDN11O75508 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLDN11O75508 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CLDN11O75508 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN11O75508 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms