Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE3O75131 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE3O75131 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CPNE3O75131 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE3O75131 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CPNE3O75131 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE3O75131 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE3O75131 AC023632.3-201ENST00000521633 145 ntBASIC19.12■□□□□ 0.65
CPNE3O75131 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CPNE3O75131 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CPNE3O75131 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE3O75131 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE3O75131 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE3O75131 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE3O75131 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPNE3O75131 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE3O75131 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CPNE3O75131 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE3O75131 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE3O75131 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE3O75131 AL023875.1-201ENST00000640777 796 ntBASIC19.11■□□□□ 0.65
CPNE3O75131 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE3O75131 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE3O75131 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE3O75131 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE3O75131 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE3O75131 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 AC133681.1-201ENST00000465482 601 ntBASIC19.1■□□□□ 0.65
CPNE3O75131 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 AC124016.1-201ENST00000609552 612 ntBASIC19.1■□□□□ 0.65
CPNE3O75131 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE3O75131 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE3O75131 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPNE3O75131 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE3O75131 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CPNE3O75131 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CPNE3O75131 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE3O75131 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE3O75131 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE3O75131 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE3O75131 PRKY-204ENST00000533551 1019 ntBASIC19.09■□□□□ 0.65
CPNE3O75131 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CPNE3O75131 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CPNE3O75131 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE3O75131 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms