Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KRT16P1-201ENST00000399124 1418 ntBASIC23.38■■□□□ 1.33
CTNND1O60716 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
CTNND1O60716 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.38■■□□□ 1.33
CTNND1O60716 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CTNND1O60716 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CTNND1O60716 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.38■■□□□ 1.33
CTNND1O60716 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.37■■□□□ 1.33
CTNND1O60716 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.37■■□□□ 1.33
CTNND1O60716 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.37■■□□□ 1.33
CTNND1O60716 MIR1238-201ENST00000408483 83 ntBASIC23.37■■□□□ 1.33
CTNND1O60716 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.37■■□□□ 1.33
CTNND1O60716 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.37■■□□□ 1.33
CTNND1O60716 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.37■■□□□ 1.33
CTNND1O60716 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.37■■□□□ 1.33
CTNND1O60716 AC092865.7-201ENST00000641832 219 ntBASIC23.37■■□□□ 1.33
CTNND1O60716 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CTNND1O60716 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.37■■□□□ 1.33
CTNND1O60716 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
CTNND1O60716 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
CTNND1O60716 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CTNND1O60716 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CTNND1O60716 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CTNND1O60716 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.36■■□□□ 1.33
CTNND1O60716 FITM1-202ENST00000559294 800 ntBASIC23.36■■□□□ 1.33
CTNND1O60716 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 AC005363.2-201ENST00000618631 242 ntBASIC23.36■■□□□ 1.33
CTNND1O60716 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.36■■□□□ 1.33
CTNND1O60716 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CTNND1O60716 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.36■■□□□ 1.33
CTNND1O60716 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CTNND1O60716 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.35■■□□□ 1.33
CTNND1O60716 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.35■■□□□ 1.33
CTNND1O60716 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.35■■□□□ 1.33
CTNND1O60716 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.35■■□□□ 1.33
CTNND1O60716 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.35■■□□□ 1.33
CTNND1O60716 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CTNND1O60716 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CTNND1O60716 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.35■■□□□ 1.33
CTNND1O60716 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CTNND1O60716 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.34■■□□□ 1.33
CTNND1O60716 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CTNND1O60716 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.34■■□□□ 1.33
CTNND1O60716 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CTNND1O60716 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.34■■□□□ 1.33
CTNND1O60716 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.34■■□□□ 1.33
CTNND1O60716 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.34■■□□□ 1.33
CTNND1O60716 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CTNND1O60716 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CTNND1O60716 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CTNND1O60716 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.34■■□□□ 1.33
CTNND1O60716 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CTNND1O60716 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 AC005229.4-201ENST00000610085 2198 ntBASIC23.33■■□□□ 1.33
CTNND1O60716 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.33■■□□□ 1.33
CTNND1O60716 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 LINC01568-207ENST00000641790 1380 ntBASIC23.33■■□□□ 1.33
CTNND1O60716 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CTNND1O60716 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.33■■□□□ 1.33
CTNND1O60716 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 AL445228.2-201ENST00000605589 952 ntBASIC23.33■■□□□ 1.33
CTNND1O60716 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CTNND1O60716 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
CTNND1O60716 AP006587.1-201ENST00000534129 1502 ntBASIC23.33■■□□□ 1.32
CTNND1O60716 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CTNND1O60716 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CTNND1O60716 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CTNND1O60716 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CTNND1O60716 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTNND1O60716 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms