Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
MID1O15344 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
MID1O15344 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.01■□□□□ 0.79
MID1O15344 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.01■□□□□ 0.79
MID1O15344 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MID1O15344 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MID1O15344 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.01■□□□□ 0.79
MID1O15344 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.01■□□□□ 0.79
MID1O15344 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.01■□□□□ 0.79
MID1O15344 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.01■□□□□ 0.79
MID1O15344 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.01■□□□□ 0.79
MID1O15344 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MID1O15344 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
MID1O15344 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MID1O15344 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MID1O15344 AC092720.2-201ENST00000602388 1665 ntBASIC20■□□□□ 0.79
MID1O15344 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MID1O15344 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20■□□□□ 0.79
MID1O15344 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20■□□□□ 0.79
MID1O15344 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20■□□□□ 0.79
MID1O15344 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20■□□□□ 0.79
MID1O15344 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20■□□□□ 0.79
MID1O15344 SAPCD2P4-201ENST00000424595 1171 ntBASIC20■□□□□ 0.79
MID1O15344 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20■□□□□ 0.79
MID1O15344 AF186192.3-201ENST00000583427 947 ntBASIC20■□□□□ 0.79
MID1O15344 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MID1O15344 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MID1O15344 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
MID1O15344 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MID1O15344 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.99■□□□□ 0.79
MID1O15344 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.99■□□□□ 0.79
MID1O15344 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
MID1O15344 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 TSPY15P-201ENST00000457163 923 ntBASIC19.99■□□□□ 0.79
MID1O15344 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
MID1O15344 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.99■□□□□ 0.79
MID1O15344 BX088651.1-201ENST00000540551 451 ntBASIC19.99■□□□□ 0.79
MID1O15344 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.99■□□□□ 0.79
MID1O15344 AC004264.1-201ENST00000608354 794 ntBASIC19.99■□□□□ 0.79
MID1O15344 REXO1L12P-201ENST00000622156 912 ntBASIC19.99■□□□□ 0.79
MID1O15344 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.99■□□□□ 0.79
MID1O15344 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.99■□□□□ 0.79
MID1O15344 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.99■□□□□ 0.79
MID1O15344 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
MID1O15344 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MID1O15344 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MID1O15344 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.98■□□□□ 0.79
MID1O15344 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MID1O15344 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MID1O15344 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
MID1O15344 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MID1O15344 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MID1O15344 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MID1O15344 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MID1O15344 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MID1O15344 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MID1O15344 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.97■□□□□ 0.79
MID1O15344 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MID1O15344 AC211429.1-201ENST00000415277 523 ntBASIC19.97■□□□□ 0.79
MID1O15344 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.97■□□□□ 0.79
MID1O15344 ECEL1P3-201ENST00000427961 737 ntBASIC19.97■□□□□ 0.79
MID1O15344 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.97■□□□□ 0.79
MID1O15344 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.97■□□□□ 0.79
MID1O15344 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.97■□□□□ 0.79
MID1O15344 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MID1O15344 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms