Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.48■□□□□ 0.71
TAF4O00268 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.48■□□□□ 0.71
TAF4O00268 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.48■□□□□ 0.71
TAF4O00268 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.48■□□□□ 0.71
TAF4O00268 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TAF4O00268 AC120498.8-201ENST00000614275 531 ntBASIC19.48■□□□□ 0.71
TAF4O00268 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.48■□□□□ 0.71
TAF4O00268 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.48■□□□□ 0.71
TAF4O00268 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.48■□□□□ 0.71
TAF4O00268 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TAF4O00268 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TAF4O00268 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.48■□□□□ 0.71
TAF4O00268 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.48■□□□□ 0.71
TAF4O00268 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.48■□□□□ 0.71
TAF4O00268 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.47■□□□□ 0.71
TAF4O00268 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TAF4O00268 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.47■□□□□ 0.71
TAF4O00268 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.47■□□□□ 0.71
TAF4O00268 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.47■□□□□ 0.71
TAF4O00268 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TAF4O00268 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.47■□□□□ 0.71
TAF4O00268 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TAF4O00268 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TAF4O00268 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TAF4O00268 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
TAF4O00268 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.46■□□□□ 0.71
TAF4O00268 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TAF4O00268 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TAF4O00268 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.46■□□□□ 0.71
TAF4O00268 AC113347.1-201ENST00000413321 391 ntBASIC19.46■□□□□ 0.71
TAF4O00268 AL355355.2-201ENST00000442321 338 ntBASIC19.46■□□□□ 0.71
TAF4O00268 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.46■□□□□ 0.71
TAF4O00268 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.46■□□□□ 0.71
TAF4O00268 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
TAF4O00268 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.46■□□□□ 0.71
TAF4O00268 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.46■□□□□ 0.71
TAF4O00268 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TAF4O00268 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TAF4O00268 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TAF4O00268 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TAF4O00268 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TAF4O00268 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TAF4O00268 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
TAF4O00268 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.44■□□□□ 0.7
TAF4O00268 AC073508.3-201ENST00000619697 1419 ntBASIC19.44■□□□□ 0.7
TAF4O00268 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TAF4O00268 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TAF4O00268 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 AC104076.2-201ENST00000448912 469 ntBASIC19.44■□□□□ 0.7
TAF4O00268 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.44■□□□□ 0.7
TAF4O00268 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.44■□□□□ 0.7
TAF4O00268 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.44■□□□□ 0.7
TAF4O00268 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TAF4O00268 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.44■□□□□ 0.7
TAF4O00268 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.44■□□□□ 0.7
TAF4O00268 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.44■□□□□ 0.7
TAF4O00268 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TAF4O00268 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TAF4O00268 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.43■□□□□ 0.7
TAF4O00268 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms