Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 AC074183.2-201ENST00000623112 922 ntBASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 TREX1-205ENST00000625293 1783 ntBASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM256-PLSCR3K7ERE1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AL451085.2-201ENST00000605085 799 ntBASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AL390961.4-201ENST00000623958 2535 ntBASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 BHLHE23-202ENST00000612929 1109 ntBASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC241377.3-202ENST00000626088 1088 ntBASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC241585.3-202ENST00000628937 1088 ntBASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC245100.8-202ENST00000629247 1058 ntBASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms