Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPIPA2E9PIF3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NPIPA2E9PIF3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 AC239809.2-201ENST00000415381 517 ntBASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 AL121603.2-201ENST00000557373 2117 ntBASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 Z99916.2-201ENST00000604037 246 ntBASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 KRT8P36-201ENST00000489121 1440 ntBASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPA2E9PIF3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.14■□□□□ 0.5
NPIPA2E9PIF3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPA2E9PIF3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms