Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 AC092338.2-201ENST00000568827 1415 ntBASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TMEM88BA6NKF7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.39■■□□□ 1.34
TMEM88BA6NKF7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TMEM88BA6NKF7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.39■■□□□ 1.34
TMEM88BA6NKF7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 AL023973.1-201ENST00000624619 620 ntBASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.39■■□□□ 1.33
TMEM88BA6NKF7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 KRT18P38-201ENST00000449496 1282 ntBASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 KRT8P45-201ENST00000414328 1447 ntBASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 AC096733.2-201ENST00000609937 1394 ntBASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TMEM88BA6NKF7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 PRELID1P1-202ENST00000567272 903 ntBASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 AC011298.2-201ENST00000617989 482 ntBASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM88BA6NKF7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 AC111152.3-201ENST00000569699 673 ntBASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 MIR3652-201ENST00000579335 131 ntBASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM88BA6NKF7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 AP006587.1-201ENST00000534129 1502 ntBASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 FAAHP1-202ENST00000446499 1238 ntBASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 RCC2P6-201ENST00000526625 1557 ntBASIC23.35■■□□□ 1.33
TMEM88BA6NKF7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 AC008040.2-201ENST00000461049 708 ntBASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 ZNF444P1-201ENST00000559497 298 ntBASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 CKBP1-201ENST00000565489 1086 ntBASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM88BA6NKF7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 KRT8P36-201ENST00000489121 1440 ntBASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 TSPY17P-201ENST00000450329 467 ntBASIC23.33■■□□□ 1.33
TMEM88BA6NKF7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms