Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 AF213884.3-201ENST00000563833 479 ntBASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV27A0A0K0K1C4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV27A0A0K0K1C4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV27A0A0K0K1C4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.08□□□□□ -0.15
TRBV27A0A0K0K1C4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV27A0A0K0K1C4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 CDV3P1-201ENST00000471403 739 ntBASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 SLC7A5P1-201ENST00000568957 537 ntBASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AP001160.3-201ENST00000601484 763 ntBASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV27A0A0K0K1C4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 AC096631.2-201ENST00000436136 790 ntBASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 AC104187.1-201ENST00000607510 612 ntBASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV27A0A0K0K1C4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV27A0A0K0K1C4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms