Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV13-1A0A0B4J241 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 AC138907.5-202ENST00000569484 235 ntBASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 MIR6084-201ENST00000622012 110 ntBASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV13-1A0A0B4J241 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 DPP3P2-201ENST00000416030 1696 ntBASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 AL358852.1-201ENST00000623174 1268 ntBASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV13-1A0A0B4J241 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms