Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC021231.2-201ENST00000594613 730 ntBASIC26.01■■□□□ 1.75
PCDHB1Q9Y5F3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHB1Q9Y5F3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB1Q9Y5F3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB1Q9Y5F3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB1Q9Y5F3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB1Q9Y5F3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB1Q9Y5F3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB1Q9Y5F3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
PCDHB1Q9Y5F3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
PCDHB1Q9Y5F3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHB1Q9Y5F3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB1Q9Y5F3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB1Q9Y5F3 MIR4449-201ENST00000578365 66 ntBASIC25.96■■□□□ 1.75
PCDHB1Q9Y5F3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB1Q9Y5F3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB1Q9Y5F3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB1Q9Y5F3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB1Q9Y5F3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHB1Q9Y5F3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB1Q9Y5F3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.94■■□□□ 1.74
PCDHB1Q9Y5F3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB1Q9Y5F3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHB1Q9Y5F3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHB1Q9Y5F3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 MIR639-201ENST00000384974 98 ntBASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB1Q9Y5F3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDHB1Q9Y5F3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PCDHB1Q9Y5F3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB1Q9Y5F3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHB1Q9Y5F3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHB1Q9Y5F3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHB1Q9Y5F3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHB1Q9Y5F3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHB1Q9Y5F3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB1Q9Y5F3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB1Q9Y5F3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHB1Q9Y5F3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.87■■□□□ 1.73
PCDHB1Q9Y5F3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
PCDHB1Q9Y5F3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 MIR6090-201ENST00000622481 60 ntBASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB1Q9Y5F3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB1Q9Y5F3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB1Q9Y5F3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PCDHB1Q9Y5F3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB1Q9Y5F3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB1Q9Y5F3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB1Q9Y5F3 AC016575.1-201ENST00000607026 382 ntBASIC25.83■■□□□ 1.73
PCDHB1Q9Y5F3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.83■■□□□ 1.73
PCDHB1Q9Y5F3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB1Q9Y5F3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB1Q9Y5F3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHB1Q9Y5F3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 AC108673.1-201ENST00000510422 1159 ntBASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 MIR3648-2-201ENST00000581792 180 ntBASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 MIR3648-1-201ENST00000615959 180 ntBASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHB1Q9Y5F3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.8■■□□□ 1.72
PCDHB1Q9Y5F3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PCDHB1Q9Y5F3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB1Q9Y5F3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB1Q9Y5F3 AC139426.1-201ENST00000568218 2529 ntBASIC25.79■■□□□ 1.72
PCDHB1Q9Y5F3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHB1Q9Y5F3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHB1Q9Y5F3 AL139393.2-201ENST00000608721 2025 ntBASIC25.78■■□□□ 1.72
PCDHB1Q9Y5F3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PCDHB1Q9Y5F3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.78■■□□□ 1.72
PCDHB1Q9Y5F3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHB1Q9Y5F3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB1Q9Y5F3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB1Q9Y5F3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHB1Q9Y5F3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB1Q9Y5F3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHB1Q9Y5F3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHB1Q9Y5F3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.76■■□□□ 1.71
PCDHB1Q9Y5F3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB1Q9Y5F3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB1Q9Y5F3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB1Q9Y5F3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHB1Q9Y5F3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHB1Q9Y5F3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB1Q9Y5F3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDHB1Q9Y5F3 DUX4L11-201ENST00000611504 1267 ntBASIC25.73■■□□□ 1.71
PCDHB1Q9Y5F3 DUX4L12-201ENST00000614593 1267 ntBASIC25.73■■□□□ 1.71
PCDHB1Q9Y5F3 DUX4L14-201ENST00000621227 1267 ntBASIC25.73■■□□□ 1.71
PCDHB1Q9Y5F3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB1Q9Y5F3 HSD17B1P1-201ENST00000590052 955 ntBASIC25.72■■□□□ 1.71
PCDHB1Q9Y5F3 CR559946.2-201ENST00000623684 991 ntBASIC25.72■■□□□ 1.71
PCDHB1Q9Y5F3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms