Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.16■■■□□ 2.42
TRIM17Q9Y577 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TRIM17Q9Y577 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.14■■■□□ 2.42
TRIM17Q9Y577 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.14■■■□□ 2.41
TRIM17Q9Y577 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.13■■■□□ 2.41
TRIM17Q9Y577 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM17Q9Y577 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TRIM17Q9Y577 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.12■■■□□ 2.41
TRIM17Q9Y577 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.12■■■□□ 2.41
TRIM17Q9Y577 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TRIM17Q9Y577 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.12■■■□□ 2.41
TRIM17Q9Y577 U85056.1-201ENST00000616429 682 ntBASIC30.12■■■□□ 2.41
TRIM17Q9Y577 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM17Q9Y577 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM17Q9Y577 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
TRIM17Q9Y577 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.11■■■□□ 2.41
TRIM17Q9Y577 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.1■■■□□ 2.41
TRIM17Q9Y577 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM17Q9Y577 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRIM17Q9Y577 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRIM17Q9Y577 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.09■■■□□ 2.41
TRIM17Q9Y577 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TRIM17Q9Y577 RARRES2P1-201ENST00000474487 481 ntBASIC30.07■■■□□ 2.4
TRIM17Q9Y577 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TRIM17Q9Y577 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.06■■■□□ 2.4
TRIM17Q9Y577 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
TRIM17Q9Y577 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TRIM17Q9Y577 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TRIM17Q9Y577 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
TRIM17Q9Y577 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM17Q9Y577 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM17Q9Y577 TSPY13P-201ENST00000338964 914 ntBASIC30.03■■■□□ 2.4
TRIM17Q9Y577 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM17Q9Y577 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM17Q9Y577 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM17Q9Y577 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
TRIM17Q9Y577 LINC00273-201ENST00000539813 1452 ntBASIC30■■■□□ 2.39
TRIM17Q9Y577 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.99■■■□□ 2.39
TRIM17Q9Y577 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TRIM17Q9Y577 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
TRIM17Q9Y577 AC004987.1-201ENST00000428627 508 ntBASIC29.98■■■□□ 2.39
TRIM17Q9Y577 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TRIM17Q9Y577 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM17Q9Y577 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.97■■■□□ 2.39
TRIM17Q9Y577 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM17Q9Y577 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TRIM17Q9Y577 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
TRIM17Q9Y577 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
TRIM17Q9Y577 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM17Q9Y577 ATP5G2P3-201ENST00000429083 425 ntBASIC29.95■■■□□ 2.39
TRIM17Q9Y577 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
TRIM17Q9Y577 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM17Q9Y577 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.94■■■□□ 2.38
TRIM17Q9Y577 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TRIM17Q9Y577 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.93■■■□□ 2.38
TRIM17Q9Y577 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.93■■■□□ 2.38
TRIM17Q9Y577 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.92■■■□□ 2.38
TRIM17Q9Y577 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.92■■■□□ 2.38
TRIM17Q9Y577 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.92■■■□□ 2.38
TRIM17Q9Y577 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
TRIM17Q9Y577 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
TRIM17Q9Y577 KRT18P60-201ENST00000312876 1297 ntBASIC29.9■■■□□ 2.38
TRIM17Q9Y577 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.89■■■□□ 2.37
TRIM17Q9Y577 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TRIM17Q9Y577 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM17Q9Y577 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.87■■■□□ 2.37
TRIM17Q9Y577 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
TRIM17Q9Y577 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.86■■■□□ 2.37
TRIM17Q9Y577 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
TRIM17Q9Y577 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.85■■■□□ 2.37
TRIM17Q9Y577 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
TRIM17Q9Y577 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
TRIM17Q9Y577 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
TRIM17Q9Y577 AC060814.1-201ENST00000554326 538 ntBASIC29.83■■■□□ 2.37
TRIM17Q9Y577 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.83■■■□□ 2.37
TRIM17Q9Y577 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM17Q9Y577 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TRIM17Q9Y577 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
TRIM17Q9Y577 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
TRIM17Q9Y577 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.81■■■□□ 2.36
TRIM17Q9Y577 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.81■■■□□ 2.36
TRIM17Q9Y577 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TRIM17Q9Y577 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.79■■■□□ 2.36
TRIM17Q9Y577 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TRIM17Q9Y577 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TRIM17Q9Y577 AC019069.1-201ENST00000610008 1333 ntBASIC29.78■■■□□ 2.36
TRIM17Q9Y577 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.78■■■□□ 2.36
TRIM17Q9Y577 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TRIM17Q9Y577 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
TRIM17Q9Y577 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
TRIM17Q9Y577 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TRIM17Q9Y577 AL592295.1-201ENST00000400984 884 ntBASIC29.75■■■□□ 2.35
TRIM17Q9Y577 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.75■■■□□ 2.35
TRIM17Q9Y577 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TRIM17Q9Y577 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TRIM17Q9Y577 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
TRIM17Q9Y577 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.74■■■□□ 2.35
TRIM17Q9Y577 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
TRIM17Q9Y577 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM17Q9Y577 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms