Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ABCB10P1-201ENST00000614297 2181 ntBASIC29.78■■■□□ 2.36
DDX41Q9UJV9 MIR3648-2-201ENST00000581792 180 ntBASIC29.77■■■□□ 2.36
DDX41Q9UJV9 MIR3648-1-201ENST00000615959 180 ntBASIC29.77■■■□□ 2.36
DDX41Q9UJV9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
DDX41Q9UJV9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.76■■■□□ 2.36
DDX41Q9UJV9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
DDX41Q9UJV9 MIR639-201ENST00000384974 98 ntBASIC29.75■■■□□ 2.35
DDX41Q9UJV9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.75■■■□□ 2.35
DDX41Q9UJV9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
DDX41Q9UJV9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.74■■■□□ 2.35
DDX41Q9UJV9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.74■■■□□ 2.35
DDX41Q9UJV9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
DDX41Q9UJV9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.73■■■□□ 2.35
DDX41Q9UJV9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.73■■■□□ 2.35
DDX41Q9UJV9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
DDX41Q9UJV9 AC016575.1-201ENST00000607026 382 ntBASIC29.71■■■□□ 2.35
DDX41Q9UJV9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
DDX41Q9UJV9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.71■■■□□ 2.35
DDX41Q9UJV9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.35
DDX41Q9UJV9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
DDX41Q9UJV9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
DDX41Q9UJV9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
DDX41Q9UJV9 MIR4449-201ENST00000578365 66 ntBASIC29.69■■■□□ 2.34
DDX41Q9UJV9 CR559946.2-201ENST00000623684 991 ntBASIC29.69■■■□□ 2.34
DDX41Q9UJV9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
DDX41Q9UJV9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.69■■■□□ 2.34
DDX41Q9UJV9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.68■■■□□ 2.34
DDX41Q9UJV9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.68■■■□□ 2.34
DDX41Q9UJV9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
DDX41Q9UJV9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
DDX41Q9UJV9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
DDX41Q9UJV9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
DDX41Q9UJV9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX41Q9UJV9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX41Q9UJV9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
DDX41Q9UJV9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.66■■■□□ 2.34
DDX41Q9UJV9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
DDX41Q9UJV9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.65■■■□□ 2.34
DDX41Q9UJV9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
DDX41Q9UJV9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
DDX41Q9UJV9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
DDX41Q9UJV9 AC010864.1-201ENST00000609407 1511 ntBASIC29.62■■■□□ 2.33
DDX41Q9UJV9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.62■■■□□ 2.33
DDX41Q9UJV9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
DDX41Q9UJV9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
DDX41Q9UJV9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
DDX41Q9UJV9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
DDX41Q9UJV9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
DDX41Q9UJV9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.61■■■□□ 2.33
DDX41Q9UJV9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
DDX41Q9UJV9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
DDX41Q9UJV9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.6■■■□□ 2.33
DDX41Q9UJV9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
DDX41Q9UJV9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.59■■■□□ 2.33
DDX41Q9UJV9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
DDX41Q9UJV9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
DDX41Q9UJV9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
DDX41Q9UJV9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
DDX41Q9UJV9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L13-201ENST00000554103 1267 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L15-201ENST00000611059 1267 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L23-201ENST00000615195 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L24-201ENST00000617576 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L22-201ENST00000618238 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L20-201ENST00000619712 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L21-201ENST00000622058 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L10-201ENST00000622460 1267 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 DUX4L25-201ENST00000624915 1269 ntBASIC29.56■■■□□ 2.32
DDX41Q9UJV9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
DDX41Q9UJV9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX41Q9UJV9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
DDX41Q9UJV9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
DDX41Q9UJV9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX41Q9UJV9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX41Q9UJV9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
DDX41Q9UJV9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
DDX41Q9UJV9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
DDX41Q9UJV9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.52■■■□□ 2.32
DDX41Q9UJV9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.51■■■□□ 2.32
DDX41Q9UJV9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
DDX41Q9UJV9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
DDX41Q9UJV9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
DDX41Q9UJV9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
DDX41Q9UJV9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
DDX41Q9UJV9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
DDX41Q9UJV9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.48■■■□□ 2.31
DDX41Q9UJV9 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.48■■■□□ 2.31
DDX41Q9UJV9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.48■■■□□ 2.31
DDX41Q9UJV9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
DDX41Q9UJV9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
DDX41Q9UJV9 LINC00273-201ENST00000539813 1452 ntBASIC29.47■■■□□ 2.31
DDX41Q9UJV9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
DDX41Q9UJV9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
DDX41Q9UJV9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.45■■■□□ 2.31
DDX41Q9UJV9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms