Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE1Q9NRR8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE1Q9NRR8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDC42SE1Q9NRR8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDC42SE1Q9NRR8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDC42SE1Q9NRR8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC42SE1Q9NRR8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC42SE1Q9NRR8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE1Q9NRR8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CDC42SE1Q9NRR8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.59□□□□□ -0.23
CDC42SE1Q9NRR8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CDC42SE1Q9NRR8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 AL449106.1-201ENST00000608517 1980 ntBASIC13.58□□□□□ -0.24
CDC42SE1Q9NRR8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42SE1Q9NRR8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE1Q9NRR8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE1Q9NRR8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42SE1Q9NRR8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE1Q9NRR8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE1Q9NRR8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42SE1Q9NRR8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42SE1Q9NRR8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE1Q9NRR8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE1Q9NRR8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC13.54□□□□□ -0.24
CDC42SE1Q9NRR8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CDC42SE1Q9NRR8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CDC42SE1Q9NRR8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CDC42SE1Q9NRR8 AC012676.1-201ENST00000574705 1949 ntBASIC13.53□□□□□ -0.24
CDC42SE1Q9NRR8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42SE1Q9NRR8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDC42SE1Q9NRR8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC42SE1Q9NRR8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDC42SE1Q9NRR8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42SE1Q9NRR8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDC42SE1Q9NRR8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 AC133561.1-201ENST00000568600 2415 ntBASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDC42SE1Q9NRR8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42SE1Q9NRR8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
CDC42SE1Q9NRR8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42SE1Q9NRR8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CDC42SE1Q9NRR8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42SE1Q9NRR8 AC079834.2-201ENST00000609776 1949 ntBASIC13.49□□□□□ -0.25
CDC42SE1Q9NRR8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42SE1Q9NRR8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42SE1Q9NRR8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDC42SE1Q9NRR8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE1Q9NRR8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.48□□□□□ -0.25
CDC42SE1Q9NRR8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CDC42SE1Q9NRR8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE1Q9NRR8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDC42SE1Q9NRR8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.47□□□□□ -0.25
CDC42SE1Q9NRR8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42SE1Q9NRR8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms